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Pass-Through Entity Tax Intake

Form 1120-S — S-Corporation Form 1065 — Partnership / LLC

This is a scoping intake — share what you'd like our CPA team to know before we prepare your entity return, K-1s, and evaluate the NJ BAIT election. We do not collect Social Security numbers, dates of birth, full EINs, or government ID through this form. Sensitive items are gathered through our secure client portal once we begin the engagement.

Before You Begin: What You Should Know

What This Form Collects

This intake covers six steps: entity details, ownership and K-1 recipients, financial summary, distributions, balance sheet, and compliance disclosures. You do not need exact figures to get started. Estimates are acceptable for financial data — your CPA reconciles everything against your actual books. For ownership and entity information, use legal names and resident states. Full Social Security numbers, full EINs, dates of birth, and government ID are collected separately through our secure client portal once we begin the engagement — never through this form.

What Is a Pass-Through Entity?

S-Corporations, partnerships, LLCs taxed as partnerships, and LLPs are all pass-through entities. They do not pay federal income tax at the entity level. Instead, income, losses, deductions, and credits flow through to each owner's individual return in proportion to ownership. Each owner receives a Schedule K-1 reporting their share. The K-1 is then used to complete the owner's personal Form 1040. Accurate K-1 preparation requires complete ownership information — names, identification numbers, ownership percentages, and resident state for every owner.

S-Corporation Owners: Reasonable W-2 Compensation

S-Corporation shareholders who provide services to the entity must receive reasonable W-2 compensation. This is an IRS requirement, not a choice. W-2 wages are subject to payroll taxes; the remaining pass-through income is not. Step 2 of this intake asks for officer W-2 wages. If officer compensation has not been established or may be below a reasonable level for the services performed, note this in the Additional Notes section and your CPA will address it during the engagement.

The NJ BAIT Election — Why It Matters

New Jersey's Business Alternative Income Tax (BAIT) allows pass-through entities to pay New Jersey income tax at the entity level. The payment is fully deductible as a federal business expense. This is significant because the federal SALT deduction for individuals is capped at $10,000. By paying NJ tax at the entity level instead, owners effectively remove NJ business income from the SALT cap calculation — producing a federal deduction that individual owners cannot achieve on their own returns.

The election must be made annually and requires estimated payments through the year. Missing a quarterly BAIT payment reduces the net benefit. If you are unsure whether the BAIT election was made, select "Not Sure / Ask CPA" in Step 2. Your CPA will evaluate the election and any estimated payment catch-up options during the consultation.

Common Pass-Through Filing Mistakes We See

A few errors come up often enough that they're worth flagging before your engagement begins.

Late or skipped BAIT estimated payments. The NJ BAIT election requires four estimated payments through the year. Missing a payment doesn't cancel the election. It does cost a portion of the federal SALT-cap workaround. We catch missed payments at intake and outline a catch-up plan.

Officer compensation set too low. S-Corp owner-employees often pay themselves a token wage while taking large distributions. The IRS treats that pattern as an audit risk. We work with clients to document the wage analysis and adjust before the next quarter.

Untracked basis schedules. Partner and shareholder basis is reset every year by income, distributions, contributions, and losses. Many clients arrive with no basis schedule maintained. We rebuild it from prior K-1s before we can file accurately.

1099s never issued. Pass-through entities that paid contractors more than $600 are required to issue Form 1099-NEC. We check the prior year's books for missed 1099s during intake.

Missed S-election deadline for new entities. A new entity wanting current-year S-Corp status must file Form 2553 within 75 days of formation. Late elections can sometimes be cured under IRS Rev. Proc. 2013-30. The relief isn't guaranteed, and the cure process is more involved.

After You Submit

Your CPA team reviews this intake within one business day. You will receive a follow-up email or call to confirm the engagement scope, request any missing documents (prior year return, QuickBooks access, financial statements), and schedule a preparation timeline. K-1s are issued to all owners after the entity return is complete. Extensions are available if you need more time to gather financial data — just flag it in the Additional Notes section.

Pass-Through Tax: Common Questions

What is the filing deadline for an S-Corporation or partnership return?
Form 1120-S (S-Corp) and Form 1065 (partnership) are both due March 15 — one month before the individual deadline. A six-month extension to September 15 is available. Missing the March 15 deadline without an extension triggers a $245 per partner or shareholder per month penalty (up to 12 months), so filing or extending on time is critical.
What is the NJ BAIT election and should my entity elect it?
New Jersey's Business Alternative Income Tax (BAIT) allows pass-through entities to pay NJ income tax at the entity level instead of pushing it to owners' individual returns. Because the payment is a fully deductible federal business expense, it effectively bypasses the $10,000 federal SALT cap — producing a federal deduction individual owners cannot achieve on their own. Most NJ pass-through entities with significant NJ income benefit from the election. If you are unsure, select 'Not Sure / Ask CPA' on the intake form and we will evaluate it during the engagement.
What is reasonable W-2 compensation for an S-Corp owner?
The IRS requires S-Corp shareholders who provide services to the entity to receive W-2 compensation comparable to what an arm's-length employer would pay for the same work. There is no fixed IRS formula — factors include industry, hours worked, and comparable market salaries. Underpaying officer compensation is one of the most common S-Corp audit triggers. We review officer compensation as part of every S-Corp engagement.
What documents should I have ready before submitting this intake?
Start with the intake form first — you do not need all documents to begin. Once submitted, your CPA will follow up and request: the prior year entity return (Form 1120-S or 1065), QuickBooks or accounting software access (or a year-end P&L and balance sheet), any IRS or state notices received, officer W-2s, and documentation of any major asset purchases or disposals during the year.
When will K-1s be issued to partners or shareholders?
K-1s are issued after the entity return is complete and accepted. For calendar-year entities filing by the March 15 deadline, K-1s typically go out in mid-to-late March. If the entity files an extension, K-1s follow after the September 15 extended deadline. Owners should not file their personal returns until they have received their K-1.
Can ProAxis prepare a multi-state pass-through return?
Yes. ProAxis regularly handles pass-through entities with operations, employees, or revenue in multiple states — particularly NJ, NY, CT, and PA. Multi-state returns require state apportionment analysis and composite return evaluation for out-of-state owners. Flag multi-state activity in Section 6 of this intake.
What happens if my K-1 arrives after my personal tax deadline?
If your entity filed an extension, K-1s arrive after September 15. That is well past the April 15 personal deadline. In that case every partner or shareholder must also extend their personal return to October 15. Filing your 1040 before the K-1 arrives means amending later, which is more work than simply extending. We coordinate entity and personal extensions together for clients with both engagements.
When should an LLC consider electing S-Corporation tax status?
S-Corp status saves self-employment tax once profits comfortably clear the cost of running payroll. The exact break-even varies by state, owner role, and what counts as a reasonable wage in your industry. The election also requires running payroll, filing Form 941 quarterly, and passing a reasonable-compensation review every year. We model the break-even for every client weighing the election. Outcomes vary; this is general information, not tax advice.
What S-Corp positions trigger IRS scrutiny most often?
The single biggest red flag is paying yourself a low W-2 wage while taking large distributions. Investment-only S-Corps that report no officer compensation also draw attention. Other triggers include big shifts between distributions and wages year over year. Listing officer time-devoted as 100% with no compensation is another common pattern auditors look for. We review every S-Corp return for these patterns before filing.

Why NJ Pass-Through Entities Choose ProAxis

S-Corp & Partnership Specialists

Form 1120-S, Form 1065, K-1 preparation, basis schedules, and entity-level tax strategy — all under one roof.

Business tax returns →

NJ BAIT Election Experts

We evaluate the BAIT election, estimated payment catch-up options, and SALT cap strategy for every eligible NJ entity.

NJ SALT consulting →

Fully Virtual, Tri-State Coverage

Secure document portals, video consultations, and CPA coverage for NJ, NY, PA, and multi-state entities.

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